ENM 1.0
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help Collective Motions of 1XNB.pdb
Mobility ( → increase)
The structure is colored based on the size of fluctuations driven by the ANM slow modes.

type: size: px


Motion along mode with RMSD: Å

NMD file -> download and view ANM in VMD

Results in plain text

Input file and parameters:
PDB title: HIGH-RESOLUTION STRUCTURES OF XYLANASES FROM B. CIRCULANS AND T. HARZIANUM IDENTIFY A NEW FOLDING PATTERN AND IMPLICATIONS FOR THE ATOMIC BASIS OF THE CATALYSIS
PDB: 1XNB,    chain: all,    model No.: 1
Exp. method: X-RAY DIFFRACTION (1.49 Å)
Cutoff for ANM nodes: 15 Å
Number of system nodes: 185
 

  logl

Reference:  Li,H., Chang,YY, Lee,JY, Bahar,I. and Yang,LW. (2017) DynOmics: dynamics of structural proteome and beyond. Nucleic Acids Res., 45, W374-W380.

Contact:

The server is maintained by Dr. Hongchun Li in the Bahar Lab at the Department of Computational & Systems Biology at the University of Pittsburgh, School of Medicine, and sponsored by the NIH awards #5R01GM099738-04 and #5P41GM103712-03 and the funding #104-2113-M-007-019 from MOST to the Yang lab at the National Tsing Hua University, Taiwan.

For questions and comments please contact Hongchun Li.